Pin 37 of a 6502 is the clock input, often labelled Phi0. In visual6502, this node is called clk0.
From clk0, two non-overlapping clocks are produced on-chip, driven around the chip and also driven off-chip.
In visual6502, the two on-chip clocks are called cclk (four inverting logic gates later than clk0, therefore approximately the same phase) and cp1 (five inverting gates later than clk0, therefore approximately the opposite phase.)
Pin 39 of a 6502 is a clock output, often labelled Phi2. In visual6502, this node is called clk2out.
Pin 3 of a 6502 is a clock output, often labelled Phi1. In visual6502, this node is called clk1out.
For most purposes, on the outside of the 6502, we concentrate on the role of Phi2, and we consider Phi0 to be the same phase. Likewise, I think of cclk as being phi2, and cp1 as being phi1, although in fact there is a small delay or phase shift.
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