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Rob, you didn't mention why you didn't use 8.182 Mhz, and 5 volts. Some of us will be curious.
I don't think there's a such thing as a 8.18181818MHz clock oscillator. The C64 used a custom PLL (8701 chip) to generate the dot clock (8.18...MHz). I did not want to have to re-create the PLL using logic which would be bulky. I found a 32.768MHz oscillator on ebay which is divided by four by a couple of ff's on the backplane. The system may be able to run at half that frequency (16.36MHz) at some point. I should note that the long term plan is to use a 6567 equivalent circuit driving HDMI rather than a vintage part, so I figured the frequency wasn't critical.
Some of the vintage parts are 5v, there's even 12v needed for the VIC / SID. I believe the ram is also 5v. I have the address decoders and buffers supplied with 3.4v however as they are low voltage CMOS surface mount parts. The CMOS parts are 5v tolerant. The SMD parts allowed smaller board sizes, but it means another supply voltage is required.
The 3.4v supply comes from the 5v supply scaled down with two power diodes in series (should drop about 1.6v). This is kinda cheesy but I didn't want to bother with additional regulators.