I want to create a small OS with bare metal CLI. What should I do?

That's a difficult question. First, have you searched around to see what's already been done in this area for the 6502? There are already several small OS type environments available. They include Dieter's CPM65, Rich Leary's DOS/65 and recently David Givens CP/M-65. Granted, all of these are based on CP/M and at least two of them use the CP/M filesystem layout. Another user here started porting Flex over to the 6502, which was a 6800 OS. You also have Fuzix, which is designed as a minimal Unix derived type of system. Yes, I'm glossing over these at a high level, just to let you know there are already options out there.

Perhaps you should define what you mean by a "small OS" and create a set of requirements for what that is. Beyond that, there needs to be some specific minimal hardware configuration that will be required to run it. Overall, a bit of a tall order, especially if you're not quite sure where to start.

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Regards, KM
https://github.com/floobydust

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http://WilsonMinesCo.com/ lots of 6502 resources
The "second front page" is http://wilsonminesco.com/links.html .
What's an additional VIA among friends, anyhow?

Just a quick follow-up, here's some links to find some of the code I referenced in my initial post:

Dietrich's CPM-65:
https://github.com/Dietrich-L/CPM-65

David Given's CPM65:
https://github.com/davidgiven/cpm65

Rich Leary's DOS/65:
http://retro.hansotten.nl/6502-sbc/dos-65/

Fuzix:
https://github.com/EtchedPixels/FUZIX

Note that DOS/65 has had several releases over the years before Rich made it open source. The main versions are a 2.x release and a later 3.x release that has more function. I've done a fair amount of work on the 3.x release and made my own version of it, currently at 3.20. My github page details both hardware and software for a running system here:
https://github.com/floobydust/CO2-Pocket-SBC-2.5

Last, here's a link to some info about FLEX:
viewtopic.php?f=2&t=6085&hilit=flex

Good luck and have fun!

_________________
Regards, KM
https://github.com/floobydust

Hi nora23169,
Do you have a hardware platform you want to run this on (such as a Commodore 64 or Beeb or perhaps a single-board computer you built or purchased), or will you be running your small OS in a simulator? There are plenty of simulators for older machines, such as the C64, which would allow you to develop for "bare metal" on that machine even if you do not own one.

The reason I ask is that different hardware will have different ways to get input from the user and display the results of commands. You will want to start with very basic I/O, like getting a single letter from the user and printing it on the screen, so you will want to pick a platform to work with first. Once you get that working, you can start adding commands, one at a time.

If you are going to use a simulator, I recommend you play around with the simulator to get used to how it operates. You should be able to load a program and run it, and you will want to check out the features that let you look at memory locations and step through the code one instruction at a time.
-SamCoVT

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x86?  We ain't got no x86.  We don't NEED no stinking x86!